BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB011F07SP1|AL426246
(609 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1795 1081 0.0
>3x_Contig1795
Length = 38452
Score = 1081 bits (536), Expect = 0.0
Identities = 578/601 (96%)
Strand = Plus / Minus
Query: 1 gatcctgatataccgtgataacaaaaatcttgacgtcgtgtagcttgtatctgtgagctc 60
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11350 gatcctgatataccgagataacaaaaatcttgacgtcgtgtagcttgtatctgtgagctc 11291
Query: 61 ttagagtccactcagtctcatcttctgatttcdatgtcttagagacattgaactcatctt 120
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 11290 ttagagtccactcagtctcatcttctgatttcaatgtcttagagacattgaactcatctt 11231
Query: 121 tcaataaatattcaacagatccattttggtagacgcttccttcaagtttaggccactcta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11230 tcaataaatattcaacagatccattttggtagacgcttccttcaagtttaggccactcta 11171
Query: 181 aacttttgttattagaatggractcaaatggcaacaaatagtagtgatcaattgggatag 240
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 11170 aacttttgttattagaatggaactcaaatggcaacaaatagtagtgatcaattgggatag 11111
Query: 241 attgatatctaagcttttctacatcttcgtaggavacttctgtccattgtgcagtttcgg 300
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 11110 attgatatctaagcttttctacatcttcgtaggaaacttctgtccattgtgcagtttcgg 11051
Query: 301 gtgtgavatgatagtgagtgcvgtcatcctctacagagtttgamgaaagagagccctggt 360
|||||| |||||||||||||| ||||||||||||||||||||| ||||||||||||||||
Sbjct: 11050 gtgtgaaatgatagtgagtgcagtcatcctctacagagtttgaagaaagagagccctggt 10991
Query: 361 aagasagtsaccctcggctctctaccgaccatccattgasatnatgttcaattaccgata 420
|||| ||| |||||||||||||||||||||||||||||| || |||||||||||||||||
Sbjct: 10990 aagaaagtaaccctcggctctctaccgaccatccattgaaataatgttcaattaccgata 10931
Query: 421 aatatgtagttgctgcvattagtagtgagatcmanataacgtgaattggatgtttagccg 480
|||||||||||||||| ||||||||||||||| | |||||||||||||||||||||||||
Sbjct: 10930 aatatgtagttgctgcaattagtagtgagatcaaaataacgtgaattggatgtttagccg 10871
Query: 481 avrrtttggctaaattggcgaatggcttaaccacatacttcavctctttgasaagtagag 540
| |||||||||||||||||||||||||||||||||||||| |||||||| ||||||||
Sbjct: 10870 aaaatttggctaaattggcgaatggcttaaccacatacttcaactctttgaaaagtagag 10811
Query: 541 gcattgtnagatgtgtaatttcctacctgaccttatgctttgggtaaccccaacgtagta 600
||||||| ||||||||||||| |||||||||||||||||||||||||| ||||||||||
Sbjct: 10810 gcattgtaagatgtgtaatttaatacctgaccttatgctttgggtaaccacaacgtagta 10751
Query: 601 t 601
|
Sbjct: 10750 t 10750
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.40 0.713 1.32
Gapped
Lambda K H
1.40 0.713 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2987
Number of Sequences: 1807
Number of extensions: 2987
Number of successful extensions: 64
Number of sequences better than 1.0e-20: 1
length of query: 609
length of database: 10,358,551
effective HSP length: 16
effective length of query: 593
effective length of database: 10,329,639
effective search space: 6125475927
effective search space used: 6125475927
T: 0
A: 40
X1: 5 (10.1 bits)
X2: 14 (28.2 bits)
S1: 12 (24.7 bits)
S2: 49 (99.3 bits)